Bait ID Bait Chr Bait Start Bait End Target ID Target Chr Target Start Target End Dataset Hi-C Capture Frequency O/E Hi-C Category Gene Content Bias Quantile Genomic Distance Bait Compartment Target Compartment nspots % within 150 nm (3D) % within 200 nm (3D) % within 350 nm (3D) % within 1 µm (3D) Mean 3D distance Fig 1 (E-I) Fig 1 (J-L) Fig 2 Fig 3 Fig 4 Fig 5 Fig 6 Bait Target chr misteli:probe_11 1 2370445 2570720 misteli:probe_74 1 18566409 18766880 Chr1GR 0.001959058 2.135286967 LR Gene Rich 0.74 15750000 B B 8582 0.4195 0.7574 2.412 24.2601 1.5602 All D,E All 11 74 1 misteli:probe_11 1 2370445 2570720 misteli:probe_91 1 22223362 22394657 Chr1GR 0.000817604 0.643386211 LR Gene Rich 0.86 20000000 B A 9447 0.1059 0.2229 0.8362 11.9721 1.9635 All D,E All 11 91 1 misteli:probe_11 1 2370445 2570720 misteli:probe_441 1 109469002 109662490 Chr1GR 0.000194356 1.173865182 LR Gene Rich 0.83 107500000 B A 2692 0.0743 0.0743 1.003 5.8692 2.4141 All D,E All 11 441 1 misteli:probe_11 1 2370445 2570720 misteli:probe_994 1 248125293 248263553 Chr1GR 0.000366446 0.982868597 LR Gene Rich 0.97 245750000 B B 962 0.2079 0.2079 1.4553 8.5239 2.3478 All D,E All 11 994 1 misteli:probe_52 1 12708719 12865743 misteli:probe_11 1 2370445 2570720 Chr1GR 0.001692796 2.308319992 LR Gene Rich 0.98 10250000 B B 42530 0.5996 1.3567 5.027 33.3976 1.3155 1E All D,E All B,D,E 52 11 1 misteli:probe_52 1 12708719 12865743 misteli:probe_74 1 18566409 18766880 Chr1GR 0.00446228 1.678595467 LR Gene Rich 0.74 5500000 B B 13434 0.3722 0.5211 2.6649 25.0558 1.5208 All D,E All B,D,E 52 74 1 misteli:probe_52 1 12708719 12865743 misteli:probe_91 1 22223362 22394657 Chr1GR 0.000353362 0.16761062 LR Gene Rich 0.86 9750000 B A 27624 0.1014 0.1484 0.6371 6.8962 2.2578 1E All D,E All B,D,E 52 91 1 misteli:probe_52 1 12708719 12865743 misteli:probe_441 1 109469002 109662490 Chr1GR 6.30E-05 0.826134818 LR Gene Rich 0.83 97250000 B A 12434 0.3619 0.3619 1.1822 4.8335 2.7287 All D,E All B,D,E 52 441 1 misteli:probe_52 1 12708719 12865743 misteli:probe_994 1 248125293 248263553 Chr1GR 0.000761419 1.017131403 LR Gene Rich 0.97 235500000 B B 4324 0.2544 0.2544 1.0407 6.5911 2.3357 All D,E All B,D,E 52 994 1 misteli:probe_91 1 22223362 22394657 misteli:probe_74 1 18566409 18766880 Chr1GR 0.001415642 1.049353544 LR Gene Rich 0.86 4250000 A B 5363 0.0746 0.2424 0.951 14.7865 1.7019 All All All 91 74 1 misteli:probe_385 1 96067992 96226766 misteli:probe_354 1 88222722 88418471 Chr1GP 0.001743399 0.965255441 LR Gene Poor 0.29 7750000 B B 660 0.1515 0.7576 1.5152 20.1515 1.5039 All All All 385 354 1 misteli:probe_385 1 96067992 96226766 misteli:probe_360 1 89759075 89913486 Chr1GP 0.001063442 1.392765024 LR Gene Poor 0.29 6250000 B B 2129 0.3288 0.4227 2.1606 30.108 1.3891 All All All 385 360 1 misteli:probe_385 1 96067992 96226766 misteli:probe_389 1 97025755 97207860 Chr1GP 0.004998621 1.259189475 LR Gene Poor 0.07 1000000 B B 652 1.8405 1.8405 13.8037 83.4356 1.1825 All All 385 389 1 misteli:probe_389 1 97025755 97207860 misteli:probe_360 1 89759075 89913486 Chr1GP 0.001680865 1.059012537 LR Gene Poor 0.07 7250000 B B 1665 0.1802 0.7207 2.8829 24.1442 1.7173 All All All 389 360 1 misteli:probe_422 1 105256970 105427280 misteli:probe_354 1 88222722 88418471 Chr1GP 0.0011431 0.575869513 LR Gene Poor 0.68 17000000 B B 13681 0.3289 0.519 2.4048 21.3946 1.6169 All All All D,E 422 354 1 misteli:probe_422 1 105256970 105427280 misteli:probe_360 1 89759075 89913486 Chr1GP 0.000957235 0.874920182 LR Gene Poor 0.68 15500000 B B 6853 0.6421 0.788 3.0935 21.1732 1.5529 All All All D,E 422 360 1 misteli:probe_422 1 105256970 105427280 misteli:probe_385 1 96067992 96226766 Chr1GP 0.001741329 1.390366507 LR Gene Poor 0.68 9250000 B B 10110 0.4154 0.7715 2.819 28.1899 1.4594 1G All All All D,E 422 385 1 misteli:probe_422 1 105256970 105427280 misteli:probe_389 1 97025755 97207860 Chr1GP 0.000893151 0.860754002 LR Gene Poor 0.68 8250000 B B 6100 0.5082 0.6721 3.0328 24.9836 1.6833 All All All D,E 422 389 1 misteli:probe_422 1 105256970 105427280 misteli:probe_463 1 115549997 115729561 Chr1GP 0.000717189 0.43550414 LR Gene Poor 0.58 10250000 B A 36494 0.6138 0.6138 3.639 29.8789 1.4105 1G All All All D,E 422 463 1 misteli:probe_422 1 105256970 105427280 misteli:probe_476 1 118815746 118989848 Chr1GP 0.001245899 1.634960875 LR Gene Poor 0.31 13500000 B B 35088 0.6355 0.6355 3.9615 30.5005 1.4261 All All All D,E 422 476 1 misteli:probe_441 1 109469002 109662490 misteli:probe_994 1 248125293 248263553 Chr1GR 2.03E-05 1 LR Gene Rich 0.97 138250000 A B 1327 0.0754 0.0754 0.5275 3.2404 2.8331 All D,E All 441 994 1 misteli:probe_463 1 115549997 115729561 misteli:probe_354 1 88222722 88418471 Chr1GP 0.000264275 0.652659241 LR Gene Poor 0.58 27250000 A B 4819 0.1868 0.1868 1.1621 13.3015 1.9011 All All All 463 354 1 misteli:probe_463 1 115549997 115729561 misteli:probe_360 1 89759075 89913486 Chr1GP 0.000950809 0.629276996 LR Gene Poor 0.58 25750000 A B 1951 0.3075 0.3075 1.1789 13.5315 1.809 All All All 463 360 1 misteli:probe_463 1 115549997 115729561 misteli:probe_385 1 96067992 96226766 Chr1GP 0.000526363 0.688707871 LR Gene Poor 0.58 19500000 A B 5214 0.1726 0.1726 1.3234 15.8036 1.801 All All All 463 385 1 misteli:probe_463 1 115549997 115729561 misteli:probe_389 1 97025755 97207860 Chr1GP 0.000779395 0.314428791 LR Gene Poor 0.58 18500000 A B 2942 0.4759 0.4759 1.4276 16.7913 1.9541 All All All 463 389 1 misteli:probe_476 1 118815746 118989848 misteli:probe_354 1 88222722 88418471 Chr1GP 0.000659422 1.050480968 LR Gene Poor 0.31 30500000 B B 4967 0.3221 0.3221 1.3489 14.2541 1.9282 All All All B 476 354 1 misteli:probe_476 1 118815746 118989848 misteli:probe_360 1 89759075 89913486 Chr1GP 0.000671257 1.316711578 LR Gene Poor 0.31 29000000 B B 3029 0.2311 0.2311 2.1129 14.5923 1.8154 All All All B 476 360 1 misteli:probe_476 1 118815746 118989848 misteli:probe_385 1 96067992 96226766 Chr1GP 0.00075594 1.623351653 LR Gene Poor 0.31 22750000 B B 3470 0.1441 0.1441 1.3833 15.9366 1.8295 All All All B 476 385 1 misteli:probe_476 1 118815746 118989848 misteli:probe_389 1 97025755 97207860 Chr1GP 0.000467989 1.280290703 LR Gene Poor 0.31 21750000 B B 2511 0.2389 0.2389 1.6328 15.5317 2.0557 All All All B 476 389 1 misteli:probe_476 1 118815746 118989848 misteli:probe_463 1 115549997 115729561 Chr1GP 0.001788757 0.79197989 LR Gene Poor 0.31 3250000 B A 6992 1.1441 1.1441 5.9211 45.5664 1.1144 All All A,B,D B 476 463 1 misteli:probe_220 4 54270488 54435016 misteli:probe_221 4 54542457 54695030 Chr4Up 0.025756407 1.043333675 TAD Gene Poor 0.6 265991 A A 544 13.0515 21.1397 52.9412 96.875 0.5589 All All E,G C,F 220 221 4 misteli:probe_220 4 54270488 54435016 misteli:probe_222 4 54794388 54995522 Chr4Up 0.014680266 1.361016206 TAD Gene Poor 0.12 542203 A A 1885 10.0265 17.7719 44.2441 92.0955 0.7538 1H All D,E E (540 kb),G C,F 220 222 4 misteli:probe_220 4 54270488 54435016 misteli:probe_224 4 55236649 55437873 Chr4Up 0.010833125 1.324530882 Boundary Gene Poor 0.43 984509 A A 1541 4.9968 8.6308 27.8391 88.9682 0.8396 All All C,F 220 224 4 misteli:probe_220 4 54270488 54435016 misteli:probe_225 4 55367316 55516239 Chr4Up 0.009443312 1.168692995 Mix Gene Poor 0.76 1089026 A A 737 2.0353 4.6133 26.1872 93.4871 0.7902 All All C,F 220 225 4 misteli:probe_220 4 54270488 54435016 misteli:probe_226 4 55586513 55775729 Chr4Up 0.005724561 1.160048505 Mix Gene Poor 0.47 1328369 A A 872 3.4404 6.1927 25.6881 90.5963 0.7423 All All C,F 220 226 4 misteli:probe_220 4 54270488 54435016 misteli:probe_227 4 56020676 56178582 Chr4Up 0.005219141 1.083793291 Mix Gene Poor 0.26 1746876 A A 1188 1.5152 3.1145 12.7946 71.5488 1.3546 All All C,F 220 227 4 misteli:probe_220 4 54270488 54435016 misteli:probe_231 4 56986598 57145686 Chr4Up 0.003485194 1.810848464 Boundary Gene Poor 0.44 2713389 A A 1670 0.479 1.1377 4.1317 46.5269 1.6574 All All C,F 220 231 4 misteli:probe_221 4 54542457 54695030 misteli:probe_222 4 54794388 54995522 Chr4Up 0.021333267 1.417883198 TAD Gene Poor 0.12 276212 A A 1319 8.1122 13.4951 39.4238 94.0865 0.6125 All All G C,F 221 222 4 misteli:probe_221 4 54542457 54695030 misteli:probe_223 4 55053142 55196692 Chr4Up 0.021333267 1.498691907 Internal Gene Poor 0.6 506174 A A 724 4.8343 8.2873 32.5967 92.8177 0.6974 All All G C,F 221 223 4 misteli:probe_221 4 54542457 54695030 misteli:probe_224 4 55236649 55437873 Chr4Up 0.014849344 1.06936972 Mix Gene Poor 0.43 718518 A A 2652 5.3544 9.7285 35.5958 97.3982 0.5158 All All C,F 221 224 4 misteli:probe_221 4 54542457 54695030 misteli:probe_225 4 55367316 55516239 Chr4Up 0.011325456 0.785107548 Internal Gene Poor 0.76 823035 A A 2139 3.3193 6.4984 26.9285 94.0159 0.6066 All All C,F 221 225 4 misteli:probe_221 4 54542457 54695030 misteli:probe_226 4 55586513 55775729 Chr4Up 0.008788508 1.095332047 Internal Gene Poor 0.47 1062378 A A 1114 3.9497 6.2837 24.3268 92.0108 0.6647 All All C,F 221 226 4 misteli:probe_221 4 54542457 54695030 misteli:probe_227 4 56020676 56178582 Chr4Up 0.006077 1.255695173 Internal Gene Poor 0.26 1480885 A A 1233 2.0276 3.5685 15.4096 81.4274 0.8375 All All C,F 221 227 4 misteli:probe_221 4 54542457 54695030 misteli:probe_231 4 56986598 57145686 Chr4Up 0.003737247 1.196458679 Mix Gene Poor 0.44 2447398 A A 2188 1.1883 1.9653 6.947 51.0512 1.2805 All All C,F 221 231 4 misteli:probe_222 4 54794388 54995522 misteli:probe_223 4 55053142 55196692 Chr4Up 0.062293706 0.964310946 TAD Gene Poor 0.12 229963 A A 942 8.3864 14.0127 41.6136 95.3291 0.5945 All All C,F 222 223 4 misteli:probe_222 4 54794388 54995522 misteli:probe_224 4 55236649 55437873 Chr4Up 0.038622901 0.657163136 TAD Gene Poor 0.43 442307 A A 1915 8.1462 14.3081 41.3055 96.0836 0.5794 All All G C,F 222 224 4 misteli:probe_222 4 54794388 54995522 misteli:probe_225 4 55367316 55516239 Chr4Up 0.015751384 0.71389213 Mix Gene Poor 0.76 546823 A A 1913 3.9728 6.9524 26.4506 91.5839 0.7307 1H All All E (540 kb),G C,F 222 225 4 misteli:probe_222 4 54794388 54995522 misteli:probe_226 4 55586513 55775729 Chr4Up 0.016691307 0.696120184 Mix Gene Poor 0.47 786166 A A 1668 5.5156 9.952 31.3549 93.0456 0.6536 All All C,F 222 226 4 misteli:probe_222 4 54794388 54995522 misteli:probe_227 4 56020676 56178582 Chr4Up 0.00936614 0.743273693 Mix Gene Poor 0.26 1204674 A A 1772 2.0316 3.8375 16.14 82.0542 0.815 All All C,F 222 227 4 misteli:probe_222 4 54794388 54995522 misteli:probe_231 4 56986598 57145686 Chr4Up 0.002871555 0.889909939 Boundary Gene Poor 0.44 2171187 A A 2184 0.4121 0.9615 5.0366 49.3132 1.2029 All All C,F 222 231 4 misteli:probe_223 4 55053142 55196692 misteli:probe_225 4 55367316 55516239 Chr4Up NA NA Internal Gene Poor NA 316861 A A 757 5.284 9.247 30.9115 90.753 0.7526 G C,F 223 225 4 misteli:probe_223 4 55053142 55196692 misteli:probe_225_5 4 55439495 55586511 Chr4Up NA NA Mix Gene Poor NA 388086 A A 963 7.269 11.5265 33.541 92.3157 0.7979 G C,F 223 225.5 4 misteli:probe_224 4 55236649 55437873 misteli:probe_225 4 55367316 55516239 Chr4Up 0.023130663 0.811989832 TAD Gene Poor 0.76 104517 A A 1707 15.1728 24.8975 53.6614 96.778 0.4878 All All C,F 224 225 4 misteli:probe_226 4 55586513 55775729 misteli:probe_227 4 56020676 56178582 Chr4Up 0.026815609 1.055691013 Internal Gene Poor 0.26 418508 A A 910 4.2857 7.6923 26.044 88.7912 0.9426 All All G C,F 226 227 4 misteli:probe_226 4 55586513 55775729 misteli:probe_231 4 56986598 57145686 Chr4Up 0.004006343 0.815835968 Mix Gene Poor 0.44 1385021 A A 1358 0.5891 0.8837 5.3756 58.0265 1.126 All All C,F 226 231 4 misteli:probe_227 4 56020676 56178582 misteli:probe_231 4 56986598 57145686 Chr4Up 0.005866311 0.719294835 Mix Gene Poor 0.44 966513 A A 1188 0.5892 1.6835 7.4916 65.6566 1.0877 All All C,F 227 231 4 misteli:probe_607 4 150978277 151124968 misteli:probe_609 4 151276234 151444375 Chr4Down 0.011216382 0.436773846 TAD Gene Rich 0.5 308682 A A 2208 8.9221 14.8551 39.8551 97.5543 0.4618 All All G C,F 607 609 4 misteli:probe_607 4 150978277 151124968 misteli:probe_610 4 151542617 151679223 Chr4Down 0.008866271 0.638893027 TAD Gene Rich 0.63 559298 A A 13447 5.979 10.5079 31.7692 95.3744 0.5695 All All E (570 kb),G C,F 607 610 4 misteli:probe_607 4 150978277 151124968 misteli:probe_611 4 151942840 152102227 Chr4Down 0.007109171 0.875994943 Mix Gene Rich 0.19 970911 A A 3117 3.5932 6.1277 23.3558 94.0648 0.5806 All All C,F 607 611 4 misteli:probe_607 4 150978277 151124968 misteli:probe_614 4 152521628 152677396 Chr4Down 0.005546439 1.160516277 Mix Gene Rich 0.71 1547890 A A 1036 3.2819 6.9498 20.7529 87.2587 0.7106 All All C,F 607 614 4 misteli:probe_607 4 150978277 151124968 misteli:probe_615 4 152897610 153104002 Chr4Down 0.004366353 1.35046676 Mix Gene Rich 0.09 1949184 A A 1897 2.214 3.69 13.6531 79.2831 0.9116 All All C,F 607 615 4 misteli:probe_607 4 150978277 151124968 misteli:probe_616 4 153155365 153328553 Chr4Down 0.004114779 1.284500698 Mix Gene Rich 0.59 2190337 A A 508 0.9843 2.7559 12.7953 71.6535 1.3864 All All C,F 607 616 4 misteli:probe_607 4 150978277 151124968 misteli:probe_617 4 153347384 153505952 Chr4Down 0.002961995 0.950177624 Mix Gene Rich 0.11 2375046 A A 1273 1.414 2.4352 9.1909 63.7078 1.5081 All All C,F 607 617 4 misteli:probe_607 4 150978277 151124968 misteli:probe_618 4 153567330 153719454 Chr4Down 0.002119664 1.082924812 Boundary Gene Rich 0.15 2591770 A A 13923 0.9265 1.7884 6.7083 60.7628 1.0188 All All C,F 607 618 4 misteli:probe_609 4 151276234 151444375 misteli:probe_611 4 151942840 152102227 Chr4Down 0.023098784 1.57516058 Internal Gene Rich 0.19 662229 A A 3340 8.0838 14.5808 43.8623 98.8922 0.4215 All D,E C,F 609 611 4 misteli:probe_609 4 151276234 151444375 misteli:probe_614 4 152521628 152677396 Chr4Down 0.009738056 1.195782685 Internal Gene Rich 0.71 1239208 A A 2196 4.5993 8.8798 27.2313 94.5811 0.5894 All All C,F 609 614 4 misteli:probe_609 4 151276234 151444375 misteli:probe_615 4 152897610 153104002 Chr4Down 0.005447871 1.12051969 Internal Gene Rich 0.09 1640502 A A 3247 2.7718 3.9421 17.5855 88.6049 0.6587 All All C,F 609 615 4 misteli:probe_609 4 151276234 151444375 misteli:probe_616 4 153155365 153328553 Chr4Down 0.004813656 1.512096378 Internal Gene Rich 0.59 1881655 A A 2825 2.1239 3.3982 14.2301 85.5575 0.7357 All All C,F 609 616 4 misteli:probe_609 4 151276234 151444375 misteli:probe_617 4 153347384 153505952 Chr4Down 0.00331186 1.039480203 Internal Gene Rich 0.11 2066364 A A 2809 1.8868 3.026 12.8159 82.1289 0.7406 All All C,F 609 617 4 misteli:probe_609 4 151276234 151444375 misteli:probe_618 4 153567330 153719454 Chr4Down 0.001558836 0.515682069 Mix Gene Rich 0.15 2283088 A A 2215 1.0835 2.3476 9.1648 73.9052 0.9278 All All C,F 609 618 4 misteli:probe_610 4 151542617 151679223 misteli:probe_611 4 151942840 152102227 Chr4Down 0.042419625 1.577918401 TAD Gene Rich 0.19 411614 A A 2816 10.2273 16.4773 46.3068 95.3125 0.5833 All All G C,F 610 611 4 misteli:probe_610 4 151542617 151679223 misteli:probe_614 4 152521628 152677396 Chr4Down 0.013552768 1.597685259 Mix Gene Rich 0.71 988592 A A 3387 4.4287 8.0307 28.6389 95.9846 0.5467 All All C,F 610 614 4 misteli:probe_610 4 151542617 151679223 misteli:probe_615 4 152897610 153104002 Chr4Down 0.006044904 1.221191743 Mix Gene Rich 0.09 1389886 A A 2424 1.9802 3.6716 14.2327 83.9934 0.8594 All All C,F 610 615 4 misteli:probe_610 4 151542617 151679223 misteli:probe_616 4 153155365 153328553 Chr4Down 0.005457264 1.097813799 Mix Gene Rich 0.59 1631039 A A 3374 1.6598 2.8749 13.5448 83.61 0.7864 All All C,F 610 616 4 misteli:probe_610 4 151542617 151679223 misteli:probe_617 4 153347384 153505952 Chr4Down 0.003547505 1.094967458 Mix Gene Rich 0.11 1815748 A A 1708 1.2295 2.4005 11.7681 78.5714 0.83 All All C,F 610 617 4 misteli:probe_610 4 151542617 151679223 misteli:probe_618 4 153567330 153719454 Chr4Down 0.00170016 0.542800264 Boundary Gene Rich 0.15 2032472 A A 13813 0.9122 1.8461 7.2178 65.0619 0.9554 All All C,F 610 618 4 misteli:probe_611 4 151942840 152102227 misteli:probe_614 4 152521628 152677396 Chr4Down 0.014702834 1.00930334 Internal Gene Rich 0.71 576979 A A 3924 3.6697 5.9378 23.1142 89.3221 0.6317 All All E (570kb),G C,F 611 614 4 misteli:probe_611 4 151942840 152102227 misteli:probe_615 4 152897610 153104002 Chr4Down 0.00699609 0.846795914 Internal Gene Rich 0.09 978273 A A 3911 2.0967 3.9887 16.6198 90.3605 0.6359 All All C,F 611 615 4 misteli:probe_611 4 151942840 152102227 misteli:probe_616 4 153155365 153328553 Chr4Down 0.005602303 0.665923233 Internal Gene Rich 0.59 1219426 A A 16144 1.4185 2.7007 11.9425 82.4765 0.7687 All All C,F 611 616 4 misteli:probe_611 4 151942840 152102227 misteli:probe_617 4 153347384 153505952 Chr4Down 0.003861535 0.760940221 Internal Gene Rich 0.11 1404135 A A 1298 1.0786 2.4653 10.0924 72.1109 1.1218 All All C,F 611 617 4 misteli:probe_611 4 151942840 152102227 misteli:probe_618 4 153567330 153719454 Chr4Down 0.001616522 0.323645332 Mix Gene Rich 0.15 1620859 A A 2839 0.9158 1.4794 7.9253 70.1303 0.9832 All All C,F 611 618 4 misteli:probe_614 4 152521628 152677396 misteli:probe_615 4 152897610 153104002 Chr4Down 0.026871319 1.055536462 Mix Gene Rich 0.09 401294 A A 4311 7.0285 12.3637 38.5989 97.0077 0.4735 1I All All E (400 kb),G C,F 614 615 4 misteli:probe_614 4 152521628 152677396 misteli:probe_618 4 153567330 153719454 Chr4Down 0.00460183 0.590114895 Mix Gene Rich 0.15 1043880 A A 2902 2.3088 3.6527 16.4025 85.4928 0.7531 All All C,F 614 618 4 misteli:probe_614_5 4 152712784 152899106 misteli:probe_616 4 153155365 153328553 Chr4Down NA NA Mix Gene Rich NA 436014 A A 1995 7.4185 13.6341 40.5013 97.594 0.488 G C,F 614.5 616 4 misteli:probe_615 4 152897610 153104002 misteli:probe_616 4 153155365 153328553 Chr4Down 0.031093067 1.099837306 Internal Gene Rich 0.59 241153 A A 2872 9.5752 16.922 48.1894 98.1546 0.4479 All All G C,F 615 616 4 misteli:probe_615 4 152897610 153104002 misteli:probe_617 4 153347384 153505952 Chr4Down 0.016592378 0.631609635 Internal Gene Rich 0.11 425862 A A 1523 5.7781 9.0611 30.7288 88.5095 1.0193 1I All All G C,F 615 617 4 misteli:probe_615 4 152897610 153104002 misteli:probe_618 4 153567330 153719454 Chr4Down 0.008584542 0.629753252 Mix Gene Rich 0.15 642586 A A 2603 5.0327 8.7591 30.5417 92.7007 0.6857 All All C,F 615 618 4 misteli:probe_616 4 153155365 153328553 misteli:probe_618 4 153567330 153719454 Chr4Down 0.018485657 0.745923126 Mix Gene Rich 0.15 401433 A A 5587 8.3229 14.0684 39.5561 90.2273 0.7964 All All E (400 kb),G C,F 616 618 4 misteli:probe_617 4 153347384 153505952 misteli:probe_618 4 153567330 153719454 Chr4Down 0.022360195 0.796827926 TAD Gene Rich 0.15 216724 A A 2110 12.6066 21.2322 50.2844 96.019 0.5338 All All C,F 617 618 4 misteli:probe_121 17 30088606 30263568 misteli:probe_40 17 9734635 9900986 Chr17 0.000284463 0.538536844 LR Gene Rich 0.73 20250000 A B 6355 0.0787 0.0787 1.0228 15.1692 1.8785 1F All All All D,E 121 40 17 misteli:probe_121 17 30088606 30263568 misteli:probe_142 17 35268046 35441605 Chr17 0.000857016 0.321404533 LR Gene Rich 0.8 5250000 A B 22555 0.2926 0.2926 1.6981 22.6779 1.5004 All All All D,E 121 142 17 misteli:probe_121 17 30088606 30263568 misteli:probe_146 17 36387556 36574537 Chr17 0.001034731 0.663200458 LR Gene Rich 1 6250000 A A 14281 0.2101 0.2101 1.6736 21.3921 1.5895 All D,E All D,E 121 146 17 misteli:probe_121 17 30088606 30263568 misteli:probe_156 17 38743489 38939529 Chr17 0.002097747 0.681471535 LR Gene Rich 0.93 8750000 A A 29679 0.1887 0.1887 1.56 23.4139 1.5518 All All All D,E 121 156 17 misteli:probe_121 17 30088606 30263568 misteli:probe_195 17 48502126 48689497 Chr17 0.000720589 0.382693728 LR Gene Rich 0.42 18500000 A A 8566 0.1634 0.1634 1.0273 14.5342 1.9152 1F All All All D,E 121 195 17 misteli:probe_121 17 30088606 30263568 misteli:probe_263 17 65509811 65678200 Chr17 0.000538633 0.54100849 LR Gene Rich 0.5 35500000 A A 6377 0.2666 0.2666 0.9409 14.5209 2.1289 All All All D,E 121 263 17 misteli:probe_142 17 35268046 35441605 misteli:probe_40 17 9734635 9900986 Chr17 0.000876316 1.427934767 LR Gene Rich 0.8 25500000 B B 1269 0 0 0.9456 18.3609 1.828 All All All 142 40 17 misteli:probe_142 17 35268046 35441605 misteli:probe_156 17 38743489 38939529 Chr17 0.001807559 0.950646456 LR Gene Rich 0.93 3500000 B A 3883 0.2318 0.2318 1.4679 21.504 1.5797 All All A,B,D 142 156 17 misteli:probe_142 17 35268046 35441605 misteli:probe_195 17 48502126 48689497 Chr17 0.000559556 0.593164434 LR Gene Rich 0.42 13250000 B A 2620 0.1908 0.1908 1.0305 11.0687 2.0083 All All All 142 195 17 misteli:probe_142 17 35268046 35441605 misteli:probe_206 17 51274882 51467771 Chr17 0.001337606 0.836829272 LR Gene Rich 0.68 16000000 B B 3142 0.3183 0.3183 1.8778 23.1063 1.6624 All All All 142 206 17 misteli:probe_142 17 35268046 35441605 misteli:probe_263 17 65509811 65678200 Chr17 0.000441353 0.696205052 LR Gene Rich 0.5 30250000 B A 1629 0.3069 0.3069 1.3505 16.8815 2.1397 All All All 142 263 17 misteli:probe_146 17 36387556 36574537 misteli:probe_40 17 9734635 9900986 Chr17 0.001031616 2.443282763 LR Gene Rich 1 26500000 A B 2620 0.0763 0.0763 1.0687 15.1145 1.8917 All D,E All 146 40 17 misteli:probe_146 17 36387556 36574537 misteli:probe_142 17 35268046 35441605 Chr17 0.007549942 0.917389145 LR Gene Rich 1 1000000 A B 783 1.2771 1.2771 11.3665 67.6884 0.8969 All D,E A,B,D 146 142 17 misteli:probe_146 17 36387556 36574537 misteli:probe_156 17 38743489 38939529 Chr17 0.00331338 0.623459928 LR Gene Rich 0.93 2500000 A A 4607 0.7163 0.7163 3.2993 38.3981 1.2187 All D,E A,B,D 146 156 17 misteli:probe_146 17 36387556 36574537 misteli:probe_206 17 51274882 51467771 Chr17 0.002437291 1.447612816 LR Gene Rich 0.68 15000000 A B 3367 0.3267 0.3267 2.7324 25.8093 1.5768 All D,E All 146 206 17 misteli:probe_146 17 36387556 36574537 misteli:probe_263 17 65509811 65678200 Chr17 0.000300271 0.498912042 LR Gene Rich 0.5 29250000 A A 2773 0.2164 0.2164 1.0458 14.3527 2.0407 All D,E All 146 263 17 misteli:probe_156 17 38743489 38939529 misteli:probe_40 17 9734635 9900986 Chr17 0.000401866 0.349200964 LR Gene Rich 0.93 29000000 A B 5097 0.1962 0.1962 1.4911 16.029 1.9025 All All All B 156 40 17 misteli:probe_156 17 38743489 38939529 misteli:probe_195 17 48502126 48689497 Chr17 0.001178725 0.626360699 LR Gene Rich 0.42 9750000 A A 2605 0.1919 0.1919 1.4587 19.501 1.7122 All All All B 156 195 17 misteli:probe_156 17 38743489 38939529 misteli:probe_206 17 51274882 51467771 Chr17 0.000872879 0.573657652 LR Gene Rich 0.68 12500000 A B 2469 0.2025 0.2025 1.2556 16.5654 1.8274 All All All B 156 206 17 misteli:probe_195 17 48502126 48689497 misteli:probe_40 17 9734635 9900986 Chr17 0.000177886 0.473956859 LR Gene Rich 0.42 38750000 A B 1354 0.0739 0.0739 0.3693 8.5672 2.3657 All All All 195 40 17 misteli:probe_195 17 48502126 48689497 misteli:probe_146 17 36387556 36574537 Chr17 0.00071708 0.736593833 LR Gene Rich 0.42 12250000 A A 3650 0.137 0.137 1.0959 13.1233 1.9643 All D,E All 195 146 17 misteli:probe_195 17 48502126 48689497 misteli:probe_206 17 51274882 51467771 Chr17 0.001005001 0.522266944 LR Gene Rich 0.68 2750000 A B 1701 0.1176 0.1176 1.2934 16.167 1.7696 All All A,B,D 195 206 17 misteli:probe_195 17 48502126 48689497 misteli:probe_263 17 65509811 65678200 Chr17 0.001031788 0.607271257 LR Gene Rich 0.5 17000000 A A 2003 0.2496 0.2496 1.0484 13.8293 1.9743 All All All 195 263 17 misteli:probe_263 17 65509811 65678200 misteli:probe_156 17 38743489 38939529 Chr17 0.000511903 0.638473218 LR Gene Rich 0.5 26750000 A A 4157 0.0241 0.0241 0.5773 12.3166 2.1583 All All All 263 156 17 misteli:probe_11_18 18 2535851 2706101 misteli:probe_89_18 18 22075002 22239510 Chr18 0.000557356 0.980653915 LR Gene Poor 0.88 19500000 A A 1396 0.1433 0.1433 1.0745 16.2607 2.0422 All All All 11 89 18 misteli:probe_11_18 18 2535851 2706101 misteli:probe_141 18 34992711 35151964 Chr18 0.000728894 1.782473275 LR Gene Poor 0.02 32500000 A B 1422 0.4923 0.4923 1.5471 16.737 1.8302 All All All 11 141 18 misteli:probe_11_18 18 2535851 2706101 misteli:probe_186 18 46316193 46486760 Chr18 0.000455538 1.220815752 LR Gene Poor 0.48 43750000 A A 2511 0.1991 0.1991 0.677 7.8853 2.198 All All All 11 186 18 misteli:probe_11_18 18 2535851 2706101 misteli:probe_250 18 62276743 62456847 Chr18 0.000327149 1 LR Gene Poor 0.18 59750000 A B 3385 0.0591 0.0591 0.5022 7.5037 2.2635 All All All 11 250 18 misteli:probe_11_18 18 2535851 2706101 misteli:probe_303 18 75525179 75695249 Chr18 0.000183618 1 LR Gene Poor 0.46 73000000 A B 2724 0.0367 0.0367 0.257 4.6623 2.5383 All All All 11 303 18 misteli:probe_89_18 18 22075002 22239510 misteli:probe_186 18 46316193 46486760 Chr18 0.000994785 1.289627066 LR Gene Poor 0.48 24250000 A A 2298 0.087 0.087 1.1314 18.0592 1.8161 All All All 89 186 18 misteli:probe_141 18 34992711 35151964 misteli:probe_89_18 18 22075002 22239510 Chr18 0.001016531 1.021498357 LR Gene Poor 0.02 13000000 B A 2415 0.2899 0.2899 1.5735 23.2298 1.881 All All All 141 89 18 misteli:probe_141 18 34992711 35151964 misteli:probe_186 18 46316193 46486760 Chr18 0.001218739 1.41714913 LR Gene Poor 0.48 11250000 B A 4561 0.3727 0.3727 2.1706 24.0079 1.5323 All All All 141 186 18 misteli:probe_250 18 62276743 62456847 misteli:probe_89_18 18 22075002 22239510 Chr18 0.000666848 1.32989217 LR Gene Poor 0.18 40250000 B A 1032 0 0 0.4845 13.6628 1.9986 All All All 250 89 18 misteli:probe_250 18 62276743 62456847 misteli:probe_141 18 34992711 35151964 Chr18 0.000905112 1.474801436 LR Gene Poor 0.18 27250000 B B 1800 0.3333 0.3333 2.1111 24.8889 1.5821 All All All 250 141 18 misteli:probe_250 18 62276743 62456847 misteli:probe_186 18 46316193 46486760 Chr18 0.001070432 0.689800508 LR Gene Poor 0.18 16000000 B A 1229 0.0814 0.0814 1.8714 25.061 1.5207 All All All 250 186 18 misteli:probe_303 18 75525179 75695249 misteli:probe_89_18 18 22075002 22239510 Chr18 0.000404773 0.779184248 LR Gene Poor 0.46 53500000 B A 1674 0.1792 0.1792 0.7168 8.3632 2.5378 All All All 303 89 18 misteli:probe_303 18 75525179 75695249 misteli:probe_141 18 34992711 35151964 Chr18 0.000377165 0.872669207 LR Gene Poor 0.46 40500000 B B 2969 0.3031 0.3031 1.2799 13.8094 1.9493 All All All 303 141 18 misteli:probe_303 18 75525179 75695249 misteli:probe_186 18 46316193 46486760 Chr18 0.000732168 1.183587758 LR Gene Poor 0.46 29250000 B A 3228 0.2478 0.2478 1.3941 18.5564 1.7309 All All All 303 186 18 misteli:probe_303 18 75525179 75695249 misteli:probe_250 18 62276743 62456847 Chr18 0.001092197 1.264883529 LR Gene Poor 0.46 13250000 B B 877 0.4561 0.4561 1.5964 24.6294 1.5211 All All All 303 250 18